STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48353.1PFAM: NLP/P60 protein; KEGG: cro:ROD_13471 putative lipoprotein. (155 aa)    
Predicted Functional Partners:
btuC
Transport system permease protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
       0.628
ADO46560.1
Protein insertion ABC transporter, inner membrane subunit FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.590
btuE
Peroxiredoxin; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
       0.580
btuD
ABC transporter related protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
       0.580
ADO48218.1
Carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: kpu:KP1_3473 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
    
 
 0.513
ADO48354.1
Diguanylate phosphodiesterase; KEGG: cko:CKO_01732 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein.
       0.506
ADO46811.1
Tetratricopeptide TPR_1 repeat-containing protein; May be involved in cell division.
    
 
 0.489
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: cko:CKO_01740 phenylalanyl-tRNA synthetase subunit beta.
       0.406
selO
Protein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.400
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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