STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48368.1PFAM: SirA-like domain-containing protein; KEGG: ent:Ent638_2271 hypothetical protein; Belongs to the sulfur carrier protein TusA family. (77 aa)    
Predicted Functional Partners:
ADO48369.1
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: set:SEN1043 putative inner membrane protein.
 
  
 0.993
ADO48308.1
PFAM: DsrE family protein; KEGG: kva:Kvar_1957 DsrE family protein.
 
  
 0.766
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
   
 
 0.749
ADO48042.1
KEGG: enc:ECL_00487 putative NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein.
  
  
 0.573
tusD
Sulfur relay protein TusD/DsrE; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE.
  
  
 0.567
ADO46449.1
Manually curated; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: efe:EFER_3568 hypothetical protein; SMART: Lysozyme subfamily 2.
  
     0.565
ADO48622.1
PFAM: protein of unknown function DUF606; KEGG: ent:Ent638_2105 hypothetical protein.
  
     0.483
ADO48552.1
PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1994 putative MFS-type transporter YdeE.
  
     0.475
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
  
 0.469
ADO49481.1
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pam:PANA_0339 hypothetical protein.
  
  
 0.420
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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