STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48369.1PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: set:SEN1043 putative inner membrane protein. (403 aa)    
Predicted Functional Partners:
ADO48368.1
PFAM: SirA-like domain-containing protein; KEGG: ent:Ent638_2271 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.993
ADO46449.1
Manually curated; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: efe:EFER_3568 hypothetical protein; SMART: Lysozyme subfamily 2.
  
     0.629
ADO48622.1
PFAM: protein of unknown function DUF606; KEGG: ent:Ent638_2105 hypothetical protein.
  
     0.583
ADO48308.1
PFAM: DsrE family protein; KEGG: kva:Kvar_1957 DsrE family protein.
 
    0.560
tusA
SirA-like domain-containing protein; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin.
  
  
 0.493
ADO48658.1
KEGG: cko:CKO_01465 hypothetical protein.
  
     0.463
ADO48552.1
PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1994 putative MFS-type transporter YdeE.
  
     0.456
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.443
ADO46428.1
KEGG: kpe:KPK_0158 selenocysteinyl-tRNA-specific translation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3.
 
   
 0.402
ADO47127.1
PFAM: protein of unknown function DUF437; KEGG: efe:EFER_2836 hypothetical protein; Belongs to the UPF0267 family.
  
     0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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