Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ADO48379.1KEGG: ecm:EcSMS35_1518 LysM/ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (333 aa)    
Predicted Functional Partners:
ADO48375.1
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: cro:ROD_13681 ABC transport ATP-binding protein (component of SufBCD complex); SMART: AAA ATPase.
  
    0.561
ADO48376.1
FeS assembly protein SufD; KEGG: enc:ECL_02367 cysteine desulfurase activator complex subunit SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
  
    0.559
sufE
Fe-S metabolism associated SufE; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family.
  
    0.556
sufS
Cysteine desulfurase, SufS subfamily; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.
  
    0.555
ADO49108.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: kva:Kvar_3424 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.532
ADO48373.1
FeS assembly scaffold SufA; KEGG: cro:ROD_13661 Fe-S cluster assembly protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
    0.518
ADO48374.1
FeS assembly protein SufB; KEGG: kpn:KPN_02140 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein.
  
    0.518
ADO48802.1
PFAM: protein of unknown function Spy-related; KEGG: kva:Kvar_3088 protein of unknown function Spy-related protein.
  
    0.499
ADO48199.1
PFAM: protein of unknown function DUF533; KEGG: ent:Ent638_2417 hypothetical protein.
   
    0.432
mdtA
Manually curated; TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ecv:APECO1_1164 multidrug efflux system subunit MdtA; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.421
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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