STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48392.1Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); KEGG: kpu:KP1_3190 putative transcriptional regulator. (294 aa)    
Predicted Functional Partners:
ADO48391.1
PFAM: periplasmic binding protein; KEGG: kpu:KP1_3191 putative iron compound ABC transport system periplasmic binding component.
 
    0.946
ADO48390.1
PFAM: transport system permease protein; KEGG: kva:Kvar_2173 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.817
ADO48388.1
ABC transporter related protein; KEGG: kpn:KPN_02104 ATP-binding component of ferric enterobactin transport; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.784
ADO48389.1
PFAM: transport system permease protein; KEGG: kpu:KP1_3194 putative iron compound ABC transport system permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.746
ADO49473.1
SMART: helix-turn-helix domain protein; KEGG: cko:CKO_02597 hypothetical protein.
  
     0.594
ADO49130.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cro:ROD_09691 putative DNA binding protein.
  
     0.573
ADO49054.1
KEGG: spe:Spro_4456 putative transmembrane anti-sigma factor.
  
     0.561
ADO48393.1
KEGG: ctu:Ctu_32990 histidine-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
       0.554
ADO48387.1
KEGG: kpe:KPK_2218 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.548
ADO47453.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spq:SPAB_00354 putative DNA-binding transcriptional regulator.
  
     0.526
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.