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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48396.1PFAM: protein of unknown function DUF152; KEGG: kpu:KP1_3209 hypothetical protein. (244 aa)    
Predicted Functional Partners:
ADO47079.1
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.
  
  
 0.616
ADO48395.1
KEGG: kpn:KPN_02097 putative ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.542
ADO48394.1
KEGG: kva:Kvar_2177 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.538
ADO48397.1
Regulatory protein LuxR; KEGG: ent:Ent638_3401 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
       0.491
ADO48398.1
Transcriptional regulator, LuxR family; KEGG: ent:Ent638_3400 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
       0.491
ADO48393.1
KEGG: ctu:Ctu_32990 histidine-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
       0.414
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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