STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48420.1KEGG: pjd:Pjdr2_4560 galactoside O-acetyltransferase. (202 aa)    
Predicted Functional Partners:
ADO47039.1
TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: enc:ECL_04349 major facilitator superfamily oligosaccharide/H+ symporter.
  
  
 0.774
ADO47890.1
TIGRFAM: capsular exopolysaccharide family; KEGG: enc:ECL_03383 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.577
wecE
TDP-4-keto-6-deoxy-D-glucose transaminase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.460
ADO47901.1
PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; manually curated; KEGG: enc:ECL_03372 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.414
ADO47903.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: set:SEN2099 putative UDP-glucose lipid carrier transferase; PFAM: sugar transferase.
  
  
 0.400
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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