STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48429.1PFAM: NLP/P60 protein; KEGG: enc:ECL_02336 NLP/P60 protein. (267 aa)    
Predicted Functional Partners:
ADO46560.1
Protein insertion ABC transporter, inner membrane subunit FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.594
ADO46811.1
Tetratricopeptide TPR_1 repeat-containing protein; May be involved in cell division.
    
 
 0.561
ADO48218.1
Carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: kpu:KP1_3473 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
    
 
 0.514
ADO48428.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.487
ADO47828.1
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: spq:SPAB_00851 D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family.
 
   
 0.427
ADO48190.1
Peptidase M23; KEGG: enc:ECL_01442 hypothetical protein; PFAM: Peptidase M23; Opacity-associated protein A domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
  
 0.413
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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