STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48435.1PFAM: protein of unknown function DUF1289; KEGG: kpe:KPK_2361 hypothetical protein. (79 aa)    
Predicted Functional Partners:
ADO47744.1
PFAM: ferredoxin; KEGG: ent:Ent638_2803 2Fe-2S ferredoxin YfaE.
  
     0.721
ADO47745.1
KEGG: kva:Kvar_1410 ribonucleotide reductase; PFAM: ribonucleotide reductase.
  
     0.706
ADO47746.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
     0.690
ADO48436.1
PFAM: aldo/keto reductase; KEGG: ecw:EcE24377A_1858 oxidoreductase YdhF.
       0.624
ADO46876.1
PFAM: protein of unknown function DUF1090; KEGG: kva:Kvar_0573 protein of unknown function DUF1090.
  
     0.553
ADO50504.1
PFAM: protein of unknown function DUF413; KEGG: enc:ECL_05016 hypothetical protein.
  
     0.548
ADO48434.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: cko:CKO_01661 hypothetical protein.
       0.542
yihI
Protein of unknown function DUF414; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.538
ADO47695.1
PFAM: protein of unknown function DUF412; KEGG: set:SEN2318 hypothetical protein.
  
     0.537
syd
Syd family protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.
  
     0.527
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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