STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48443.1KEGG: set:SEN1602 outer membrane lipoprotein SlyB precursor. (155 aa)    
Predicted Functional Partners:
ADO47718.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: cko:CKO_00524 hypothetical protein.
  
    0.597
ADO49088.1
PFAM: OmpA/MotB domain protein; KEGG: enc:ECL_02689 putative outer membrane lipoprotein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
  
 0.585
ADO46801.1
PFAM: OmpA/MotB domain protein; KEGG: sdy:SDY_0930 outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
  
 0.582
ADO46875.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: enc:ECL_04498 hypothetical protein.
  
    0.566
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.
    
 
 0.512
ADO48156.1
UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.
  
    0.509
flhC
Flagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.
  
     0.501
ADO50393.1
PFAM: protein of unknown function DUF416; KEGG: kva:Kvar_4861 protein of unknown function DUF416.
  
     0.458
ADO48442.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kpu:KP1_3053 hypothetical protein; SMART: GGDEF domain containing protein.
       0.453
ADO46874.1
KEGG: cko:CKO_04501 hypothetical protein.
  
    0.443
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.