STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48477.1PFAM: Carboxylesterase type B; KEGG: cko:CKO_01460 hypothetical protein; Belongs to the type-B carboxylesterase/lipase family. (502 aa)    
Predicted Functional Partners:
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.818
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.813
ADO47218.1
PFAM: peptidase M28; KEGG: cko:CKO_04114 alkaline phosphatase isozyme conversion aminopeptidase.
  
 0.779
ADO48476.1
PFAM: protein of unknown function DUF1338; KEGG: enc:ECL_02041 hypothetical protein.
       0.651
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 0.649
aes
Acetyl esterase; Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively regulates MalT activity by antagonizing maltotriose binding. Inhibits MelA galactosidase activity.
 
  
 0.551
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
    
  0.549
ADO48128.1
KEGG: enc:ECL_01707 GP13; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein.
  
     0.487
ADO48659.1
TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: cko:CKO_01440 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein.
    
 0.483
ADO49827.1
TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: eum:ECUMN_0145 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase; helicase domain protein.
    
 0.483
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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