STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48491.1PFAM: GlpM family protein; KEGG: enc:ECL_02268 hypothetical protein. (111 aa)    
Predicted Functional Partners:
ADO50666.1
KEGG: ses:SARI_03800 hypothetical protein.
  
     0.689
ADO50332.1
KEGG: ses:SARI_04626 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein.
  
     0.650
ADO49254.1
PFAM: sulfatase; KEGG: enc:ECL_02915 sulfatase.
  
     0.646
ADO49593.1
PFAM: high-affinity nickel-transporter; KEGG: eck:EC55989_2361 nickel/cobalt efflux protein RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.620
ADO47516.1
PFAM: protein of unknown function DUF1407; KEGG: cko:CKO_00277 hypothetical protein.
  
     0.590
ADO47684.1
PFAM: Glutathione S-transferase domain; KEGG: kva:Kvar_1363 glutathione S-transferase domain protein.
  
     0.559
ADO48489.1
Integral membrane sensor signal transduction histidine kinase; KEGG: kpu:KP1_2528 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
 
     0.558
ADO48490.1
Two component transcriptional regulator, winged helix family; KEGG: kpu:KP1_2531 DNA-binding transcriptional regulator RstA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
       0.548
ADO48171.1
PFAM: flagellar FlhE family protein; KEGG: set:SEN1091 flagellar protein FlhE precursor.
  
     0.537
ADO48437.1
PFAM: Fusaric acid resistance protein conserved region; KEGG: kpn:KPN_01984 hypothetical protein.
  
     0.516
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.