Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADO48522.1PFAM: type II and III secretion system protein; KEGG: ype:YPO2280 putative phage-related secreted protein; Belongs to the bacterial secretin family. (406 aa)    
Predicted Functional Partners:
ADO49181.1
KEGG: cko:CKO_02225 hypothetical protein; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
  
 0.799
ADO49185.1
TIGRFAM: general secretion pathway protein C; KEGG: cko:CKO_02229 hypothetical protein.
 
 
 0.756
ADO49182.1
KEGG: cko:CKO_02226 hypothetical protein; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
 
  
 0.644
ADO49183.1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.625
ADO46951.1
KEGG: pmr:PMI1916 hypothetical protein.
  
     0.612
ADO49863.1
PFAM: Type II secretion system F domain; KEGG: cko:CKO_03270 type IV pilin biogenesis protein.
 
  
 0.599
ADO48059.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
  
 0.598
ADO47283.1
PFAM: type II secretion system protein E; KEGG: cro:ROD_46531 putative type IV pilus biogenesis protein CfcH.
 
  
 0.564
ADO49178.1
TIGRFAM: general secretion pathway protein J; KEGG: enc:ECL_02792 general secretion pathway protein J.
 
  
 0.558
ADO49862.1
PFAM: type II secretion system protein E; KEGG: enc:ECL_00903 protein transport protein HofB.
 
  
 0.553
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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