Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48527.1PFAM: Spore coat protein U; KEGG: vap:Vapar_1923 spore coat U domain protein. (176 aa)    
Predicted Functional Partners:
ADO48528.1
KEGG: vap:Vapar_1922 P pilus assembly protein chaperone PapD-like protein.
 
 
 0.979
ADO48529.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: vap:Vapar_1921 fimbrial biogenesis outer membrane usher protein.
 
  
 0.939
ADO49708.1
PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bcj:BCAM1115 putative haemagglutinin-related autotransporter protein.
  
     0.631
ADO48530.1
PFAM: Spore coat protein U; KEGG: vap:Vapar_1920 spore coat U domain protein.
 
    
0.604
ADO48526.1
Transcriptional regulator, LysR family; KEGG: cko:CKO_04223 hypothetical protein; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR.
       0.443
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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