Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADO48547.1PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: set:SEN1530 multiple drug resistance protein MarC. (222 aa)    
Predicted Functional Partners:
ADO48548.1
Transcriptional regulator, MarR family; KEGG: marR; multiple antibiotic resistance protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
     
 0.512
ADO48549.1
Transcriptional regulator, AraC family; KEGG: cko:CKO_01552 DNA-binding transcriptional activator MarA; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
     
 0.432
ADO48550.1
KEGG: ent:Ent638_1996 hypothetical protein.
       0.409
ADO50233.1
PFAM: MscS Mechanosensitive ion channel; KEGG: cko:CKO_03675 hypothetical protein.
  
    0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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