STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48550.1KEGG: ent:Ent638_1996 hypothetical protein. (72 aa)    
Predicted Functional Partners:
ADO48549.1
Transcriptional regulator, AraC family; KEGG: cko:CKO_01552 DNA-binding transcriptional activator MarA; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.965
ADO48548.1
Transcriptional regulator, MarR family; KEGG: marR; multiple antibiotic resistance protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
  
 0.940
ADO49968.1
KEGG: kva:Kvar_4400 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.743
slyA
Regulatory protein MarR; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family.
   
  
 0.409
ADO48547.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: set:SEN1530 multiple drug resistance protein MarC.
       0.409
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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