Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48552.1PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1994 putative MFS-type transporter YdeE. (397 aa)    
Predicted Functional Partners:
ADO48622.1
PFAM: protein of unknown function DUF606; KEGG: ent:Ent638_2105 hypothetical protein.
  
     0.635
ADO48658.1
KEGG: cko:CKO_01465 hypothetical protein.
  
     0.608
ADO47042.1
PFAM: protein of unknown function DUF1971; KEGG: kpu:KP1_3657 putative tellurite resistance protein.
  
     0.595
ADO47427.1
KEGG: kpu:KP1_4166 hypothetical protein.
  
     0.545
ADO48551.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_1995 O-acetylserine/cysteine export protein.
       0.531
ADO49254.1
PFAM: sulfatase; KEGG: enc:ECL_02915 sulfatase.
  
     0.511
ADO48368.1
PFAM: SirA-like domain-containing protein; KEGG: ent:Ent638_2271 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
     0.475
ADO48553.1
Hypothetical protein; Manually curated; KEGG: ebd:ECBD_2105 hypothetical protein.
       0.473
ADO48131.1
KEGG: enc:ECL_01710 GP16; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure.
  
     0.457
ADO48369.1
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: set:SEN1043 putative inner membrane protein.
  
     0.456
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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