STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48555.1PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: enc:ECL_02203 hypothetical protein. (499 aa)    
Predicted Functional Partners:
ADO48556.1
PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: enc:ECL_02204 hypothetical protein.
 
    
0.834
ADO47236.1
KEGG: ebi:EbC_21190 NapD-like protein.
 
     0.733
ADO47238.1
PFAM: sulfatase; KEGG: met:M446_6751 sulfatase.
 
     0.653
ADO49754.1
PFAM: protein of unknown function UPF0118; KEGG: kva:Kvar_4154 hypothetical protein.
  
     0.503
ADO48854.1
PFAM: porin Gram-negative type; KEGG: ses:SARI_00441 hypothetical protein.
  
     0.497
ADO47632.1
KEGG: ppg:PputGB1_2814 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.477
ADO49709.1
KEGG: spe:Spro_1114 beta-lactamase domain-containing protein.
 
     0.450
ADO48554.1
Hypothetical protein; Manually curated; KEGG: kpe:KPK_4070 hypothetical protein.
       0.447
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
  
     0.431
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.