Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48589.1TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: sfv:SFV_1739 osmotically inducible protein; PFAM: OsmC family protein. (143 aa)    
Predicted Functional Partners:
ADO48592.1
PFAM: 30S ribosomal subunit S22; KEGG: kva:Kvar_2457 30S ribosomal subunit S22.
  
    0.756
dps
Ferritin Dps family protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.
 
  
 0.733
ADO46875.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: enc:ECL_04498 hypothetical protein.
   
  
 0.683
ADO47718.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: cko:CKO_00524 hypothetical protein.
   
  
 0.680
ADO48985.1
KEGG: cko:CKO_02016 hypothetical protein.
   
    0.620
ADO49203.1
TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: ddc:Dd586_0647 hypothetical protein.
   
    0.615
ADO47852.1
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); KEGG: ctu:Ctu_40080 hypothetical protein; PFAM: glycosyl transferase family 20.
  
    0.610
ADO48590.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2459 transcriptional regulator, LysR family.
       0.604
ADO50013.1
Catalase; KEGG: dze:Dd1591_0973 catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
 
  
 0.589
ADO47304.1
KEGG: kva:Kvar_1046 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
   
  
 0.588
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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