Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48590.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2459 transcriptional regulator, LysR family. (295 aa)    
Predicted Functional Partners:
ADO48591.1
KEGG: kpu:KP1_2907 hypothetical protein.
 
    0.713
ADO50562.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_03052 hypothetical protein.
  
     0.686
ADO48526.1
Transcriptional regulator, LysR family; KEGG: cko:CKO_04223 hypothetical protein; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR.
  
     0.674
ADO47244.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pen:PSEEN3601 DNA-binding transcriptional regulator CynR.
  
     0.658
ADO50026.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: etr:ETAE_2781 transcriptional regulator.
  
     0.635
ADO48478.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_1967 LysR family transcriptional regulator.
  
     0.629
ADO47982.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_02427 hypothetical protein.
  
     0.625
ADO48589.1
TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: sfv:SFV_1739 osmotically inducible protein; PFAM: OsmC family protein.
       0.604
ADO47849.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpu:KP1_3776 putative transcriptional regulator.
  
     0.600
ADO50513.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpu:KP1_0115 DNA-binding transcriptional regulator OxyR.
  
     0.597
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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