Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48619.1KEGG: ctu:Ctu_20950 HTH-type transcriptional regulator McbR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (221 aa)    
Predicted Functional Partners:
ADO48562.1
KEGG: enc:ECL_02172 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
     0.743
ADO46285.1
GntR domain protein; KEGG: enc:ECL_00008 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.592
ADO48620.1
Helix-turn-helix domain protein; KEGG: kpu:KP1_2977 putative regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein.
 
     0.588
ADO49984.1
Transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: cro:ROD_49131 transcriptional regulator; SMART: helix-turn-helix domain protein.
   
  
 0.559
ADO50627.1
KEGG: kva:Kvar_5059 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.551
ADO47733.1
Transcriptional regulator, IclR family; KEGG: set:SEN2274 putative transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
  
  
 0.549
ADO50064.1
Regulatory protein GntR HTH; KEGG: ebi:EbC_23320 GntR-family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH.
  
  
 0.546
ADO46417.1
GntR domain protein; KEGG: kpe:KPK_0147 DNA-binding transcriptional repressor LldR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.505
ADO47150.1
KEGG: kpu:KP1_1099 DNA-binding transcriptional regulator CsiR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
     0.496
prmB
protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.475
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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