Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48650.1KEGG: kva:Kvar_2367 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein. (388 aa)    
Predicted Functional Partners:
ADO48648.1
Helix-turn-helix domain protein; KEGG: kpu:KP1_3002 putative regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein.
 
   
 0.570
ADO48649.1
KEGG: pct:PC1_0706 hypothetical protein.
       0.532
ADO48706.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kpn:KPN_01308 L-Ala-D/L-Glu epimerase, a muconate lactonizing enzyme.
     
 0.428
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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