STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48653.1KEGG: kpu:KP1_3006 hypothetical protein. (222 aa)    
Predicted Functional Partners:
ligB
DNA ligase (NAD(+)); Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.
  
     0.555
ADO47417.1
KEGG: ent:Ent638_3082 hypothetical protein.
  
     0.511
ADO47459.1
KEGG: enc:ECL_03892 hypothetical protein.
  
     0.490
ADO48654.1
PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02029 extracellular solute-binding protein.
       0.489
ADO47176.1
KEGG: kpe:KPK_0880 hypothetical protein.
  
     0.481
ADO46747.1
PFAM: Barstar (barnase inhibitor); KEGG: sdy:SDY_3415 hypothetical protein.
  
    0.480
ADO48655.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
 
     0.473
ADO50666.1
KEGG: ses:SARI_03800 hypothetical protein.
  
     0.473
ADO47032.1
PFAM: regulatory protein LysR; KEGG: cro:ROD_06471 LysR-family transcriptional regulator.
  
     0.464
ADO47322.1
PFAM: Protein of unknown function DUF2002; KEGG: kva:Kvar_1068 protein of unknown function DUF2002.
  
     0.464
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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