Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO48681.1KEGG: ent:Ent638_1943 hypothetical protein. (879 aa)    
Predicted Functional Partners:
ADO48680.1
KEGG: ent:Ent638_1944 putative outer membrane lipoprotein.
 
   
 0.906
ADO48679.1
PFAM: Uncharacterised conserved protein UCP025560; KEGG: kpu:KP1_2463 hypothetical protein.
 
   
 0.905
ADO47887.1
PFAM: AsmA family protein; KEGG: kva:Kvar_1546 AsmA family protein.
  
   
 0.795
ADO46360.1
PFAM: AsmA family protein; KEGG: enc:ECL_00105 hypothetical protein.
  
   
 0.788
ADO49845.1
KEGG: enc:ECL_00927 hypothetical protein.
  
     0.771
ADO49789.1
Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator.
  
     0.767
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.764
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.762
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
     0.760
ADO46290.1
KEGG: enc:ECL_00013 putative ATP/GTP-binding protein.
 
     0.759
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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