Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48700.1PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_C6555 multidrug efflux system protein MdtO. (669 aa)    
Predicted Functional Partners:
ADO48699.1
PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_C6554 multidrug resistance protein MdtN.
 
  
 0.952
ADO48698.1
KEGG: bur:Bcep18194_C6553 hypothetical protein.
       0.785
ADO49529.1
PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_01278 major type 1 subunit fimbrin (pilin).
  
     0.546
ADO48697.1
PFAM: regulatory protein TetR; KEGG: pfl:PFL_4557 TetR family transcriptional regulator.
  
    0.545
ADO47487.1
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.527
ADO46351.1
KEGG: eoh:ECO103_0297 hypothetical protein.
  
     0.501
ADO47825.1
KEGG: kpn:KPN_02576 multidrug resistance outer membrane protein MdtQ; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
     
 0.434
ADO46906.1
PFAM: Fimbrial protein domain-containing protein; KEGG: kva:Kvar_0777 fimbrial protein.
  
     0.401
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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