Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48734.1PFAM: MltA-interacting MipA family protein; KEGG: aha:AHA_1673 MltA-interacting protein MipA. (268 aa)    
Predicted Functional Partners:
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
    0.700
ADO49472.1
KEGG: ent:Ent638_1073 putative integral membrane protein.
  
     0.667
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.591
ADO49441.1
Helix-turn-helix domain protein; KEGG: kpu:KP1_1565 putative transcriptional regulators; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.585
ADO48093.1
Manually curated; PFAM: helix-turn-helix domain protein; KEGG: seg:SG1189 predicted phage regulatory protein; SMART: helix-turn-helix domain protein.
  
     0.566
ADO46351.1
KEGG: eoh:ECO103_0297 hypothetical protein.
  
     0.551
ADO46602.1
PFAM: protein of unknown function DUF1471; KEGG: kva:Kvar_0320 protein of unknown function DUF1471.
  
     0.529
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
  
   
 0.501
ADO46617.1
KEGG: kpu:KP1_5096 hypothetical protein.
  
     0.468
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
  
     0.467
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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