Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO48736.1PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eok:G2583_1668 hypothetical protein. (465 aa)    
Predicted Functional Partners:
ADO48735.1
PFAM: Uncharacterised protein family UPF0283; KEGG: enc:ECL_01793 hypothetical protein.
 
  
 0.996
ADO48737.1
KEGG: kva:Kvar_3008 phage shock protein PspD; TIGRFAM: phage shock protein PspD; PFAM: shock protein PspD.
     
 0.758
ADO48739.1
KEGG: efe:EFER_1657 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein.
 
   
 0.735
ADO48738.1
KEGG: kva:Kvar_3009 phage shock protein C, PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein.
 
   
 0.716
mepA
Peptidase U6 penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. Belongs to the peptidase M74 family.
  
     0.641
ADO48740.1
KEGG: efe:EFER_1658 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein.
     
 0.598
ADO49107.1
PFAM: protein of unknown function DUF882; KEGG: esa:ESA_02416 hypothetical protein.
  
     0.491
ADO49735.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cko:CKO_02961 hypothetical protein.
  
     0.471
ADO49005.1
KEGG: bmt:BSUIS_B0425 hypothetical protein.
  
     0.461
ADO50393.1
PFAM: protein of unknown function DUF416; KEGG: kva:Kvar_4861 protein of unknown function DUF416.
  
     0.459
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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