Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADO48839.1KEGG: ydjX; UPF0043 membrane protein YdjX; manually curated; PFAM: SNARE associated Golgi protein. (238 aa)    
Predicted Functional Partners:
YdjY
ydjY; KEGG: ydjY; uncharacterized protein YdjY.
 
  
 0.939
ADO48842.1
KEGG: kpe:KPK_3227 putative ABC transporter solute-binding protein.
 
  
 0.819
ADO48843.1
KEGG: kpn:KPN_01215 ABC transporter membrane protein.
 
   
 0.768
ADO48845.1
Rhodanese domain protein; KEGG: ebr:ECB_01726 predicted thiosulfate sulfur transferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
 
  
 0.758
ADO48841.1
PFAM: SNARE associated Golgi protein; KEGG: ecq:ECED1_1954 conserved hypothetical protein; putative inner membrane protein.
 
    
0.669
ADO48844.1
KEGG: kva:Kvar_3100 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.609
ADO48846.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ect:ECIAI39_1296 putative phosphatidyl transferase, inner membrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.506
ADO48838.1
Manually curated; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; KEGG: efe:EFER_1316 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.
       0.484
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
  
     0.456
ADO46351.1
KEGG: eoh:ECO103_0297 hypothetical protein.
  
     0.401
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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