Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO48854.1PFAM: porin Gram-negative type; KEGG: ses:SARI_00441 hypothetical protein. (361 aa)    
Predicted Functional Partners:
ADO49104.1
PFAM: porin Gram-negative type; KEGG: esa:ESA_02413 hypothetical protein.
  
  
  0.911
ADO48852.1
KEGG: cko:CKO_00358 PTS system N-acetylmuramic acid transporter subunits EIIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
     0.679
ADO48853.1
PFAM: Protein of unknown function DUF2057; KEGG: cko:CKO_00361 hypothetical protein.
       0.610
ADO49693.1
KEGG: vha:VIBHAR_05112 hypothetical protein.
  
     0.562
btuB
TonB-dependent vitamin B12 receptor; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.
    
 0.557
yfeW
PFAM: beta-lactamase; KEGG: stt:t0381 hypothetical protein; Belongs to the peptidase S12 family. YfeW subfamily.
       0.551
ADO49088.1
PFAM: OmpA/MotB domain protein; KEGG: enc:ECL_02689 putative outer membrane lipoprotein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 0.551
ADO46801.1
PFAM: OmpA/MotB domain protein; KEGG: sdy:SDY_0930 outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 0.532
ADO50624.1
PFAM: protein of unknown function DUF1040; KEGG: enc:ECL_05123 hypothetical protein.
  
     0.529
ADO46898.1
PFAM: amino acid permease-associated region; KEGG: eoi:ECO111_3900 putative transporter.
  
    0.522
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.