STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48881.1PFAM: protein of unknown function DUF441; KEGG: kva:Kvar_3170 protein of unknown function DUF441. (148 aa)    
Predicted Functional Partners:
mdtG
PFAM: major facilitator superfamily MFS_1; KEGG: sea:SeAg_B2035 drug efflux system protein MdtG.
  
     0.576
ADO49677.1
PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_01139 putative major facilitator transporter.
  
     0.529
ADO48880.1
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: enc:ECL_02481 YbaK/prolyl-tRNA synthetase-associated domain protein.
       0.483
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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