STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48887.1Diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein; TIGRFAM: diguanylate cyclase; KEGG: enc:ECL_02490 diguanylate cyclase with GAF sensor; PFAM: GGDEF domain containing protein; GAF domain protein. (335 aa)    
Predicted Functional Partners:
ADO47050.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: efe:EFER_1580 cAMP phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.833
ADO50443.1
Manually curated; PFAM: EAL domain protein; KEGG: cko:CKO_02697 hypothetical protein; SMART: EAL domain protein.
   
 0.815
ADO49070.1
Diguanylate phosphodiesterase; KEGG: asa:ASA_0832 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein.
 
  
 0.809
ADO47788.1
Diguanylate phosphodiesterase; KEGG: enc:ECL_03495 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein.
 
  
 0.808
ADO48207.1
KEGG: kva:Kvar_3381 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
 
    0.808
ADO47287.1
Diguanylate phosphodiesterase; Manually curated; PFAM: EAL domain protein; regulatory protein LuxR; KEGG: aha:AHA_2089 cyclic diguanylate phosphodiesterase domain-containing protein; SMART: EAL domain protein; regulatory protein LuxR.
  
 0.806
ADO49582.1
KEGG: enc:ECL_01224 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein.
 
 0.799
ADO47616.1
Diguanylate cyclase/phosphodiesterase; KEGG: kpn:KPN_02745 hypothetical protein; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
  
 0.790
ADO47535.1
KEGG: kpe:KPK_1302 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
  
 0.785
ADO46492.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; SMART: EAL domain protein; GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; KEGG: kva:Kvar_0222 diguanylate cyclase/phosphodiesterase with extracellular sensor; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein.
  
    0.770
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.