STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48902.1KEGG: cko:CKO_00426 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin. (1455 aa)    
Predicted Functional Partners:
ADO48137.1
PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein.
  
     0.682
ADO47868.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: sec:SC3680 putative transcriptional regulatory protein.
  
   
 0.571
ADO48202.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ses:SARI_01069 hypothetical protein.
  
     0.522
ADO50097.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A3198 fimbrial usher protein.
  
    0.494
ADO48104.1
PFAM: C-5 cytosine-specific DNA methylase; KEGG: kpn:KPN_01395 putative site-specific DNA methylase.
  
     0.468
ADO46431.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: efe:EFER_2778 putative regulatory protein.
  
     0.461
ADO48133.1
KEGG: enc:ECL_01712 GP18; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L.
  
     0.422
pagP
Antimicrobial peptide resistance and lipid A acylation PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.411
ADO50558.1
PFAM: nucleoside recognition domain protein; KEGG: ses:SARI_03062 hypothetical protein.
  
     0.401
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.