STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtHPFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_3480 multidrug resistance protein MdtH. (402 aa)    
Predicted Functional Partners:
ADO49380.1
PFAM: outer membrane porin; KEGG: kpe:KPK_3870 outer membrane porin, OprD family.
  
     0.558
ADO48976.1
KEGG: cko:CKO_02000 hypothetical protein.
       0.531
ADO47783.1
KEGG: kva:Kvar_1446 hypothetical protein.
  
     0.477
ADO48972.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cko:CKO_01994 hypothetical protein.
       0.470
ADO48973.1
PFAM: protein of unknown function DUF480; KEGG: kva:Kvar_3303 protein of unknown function DUF480; Belongs to the UPF0502 family.
       0.470
ADO48974.1
KEGG: kpu:KP1_2067 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase.
       0.470
ADO48308.1
PFAM: DsrE family protein; KEGG: kva:Kvar_1957 DsrE family protein.
  
     0.464
ADO48978.1
PFAM: DinI family protein; KEGG: enc:ECL_02577 DNA damage-inducible protein I.
 
     0.459
ADO48758.1
Phosphatidylglycerophosphatase; PFAM: phosphoesterase PA-phosphatase related; KEGG: cro:ROD_17221 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related.
  
     0.409
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.