STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49020.1PFAM: helix-turn-helix HxlR type; KEGG: ent:Ent638_1511 HxlR family transcriptional regulator. (127 aa)    
Predicted Functional Partners:
ADO49984.1
Transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: cro:ROD_49131 transcriptional regulator; SMART: helix-turn-helix domain protein.
   
  
 0.677
ADO49021.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_1510 short chain dehydrogenase.
 
    0.628
ADO50190.1
KEGG: cko:CKO_03618 hypothetical protein.
 
     0.615
ADO49019.1
KEGG: etr:ETAE_1758 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase.
       0.595
ADO47963.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.499
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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