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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49053.1PFAM: extracellular solute-binding protein family 1; KEGG: kva:Kvar_3380 extracellular solute-binding protein family 1. (338 aa)    
Predicted Functional Partners:
ADO49052.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_03175 iron(III) ABC transporter, permease protein SfuB.
 
 0.997
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 0.988
ADO49009.1
FTR1 family protein; KEGG: enc:ECL_02615 ferrous iron permease; TIGRFAM: FTR1 family protein; PFAM: iron permease FTR1.
   
  
 0.709
ADO49899.1
KEGG: cko:CKO_03315 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
  
  
 0.602
btuF
Periplasmic binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
  
  
 0.562
ADO49149.1
KEGG: ecv:APECO1_1201 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
  
 0.512
ADO50013.1
Catalase; KEGG: dze:Dd1591_0973 catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
   
 
 0.449
ADO49055.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: spe:Spro_4455 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
       0.436
ADO46324.1
TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: kpu:KP1_5431 2-aminoethylphosphonate transporter ATP-binding component; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.431
ADO49054.1
KEGG: spe:Spro_4456 putative transmembrane anti-sigma factor.
       0.431
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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