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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49056.1Manually curated; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_4454 TPR repeat-containing protein; SMART: Tetratricopeptide repeat. (177 aa)    
Predicted Functional Partners:
ADO49054.1
KEGG: spe:Spro_4456 putative transmembrane anti-sigma factor.
 
     0.942
ADO49055.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: spe:Spro_4455 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
 
    0.819
ADO50452.1
PFAM: fatty acid desaturase; KEGG: ent:Ent638_2352 fatty acid desaturase.
  
     0.541
ADO48687.1
KEGG: ent:Ent638_2136 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein.
   
   0.518
ADO48383.1
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: kpn:KPN_02127 molybdate ABC transporter periplasmic substrate-binding protein.
  
     0.515
ADO46537.1
KEGG: etr:ETAE_0827 hypothetical protein.
  
     0.468
ADO49059.1
Rieske (2Fe-2S) iron-sulfur domain protein; Converts carnitine to trimethylamine and malic semialdehyde.
 
     0.427
ADO49053.1
PFAM: extracellular solute-binding protein family 1; KEGG: kva:Kvar_3380 extracellular solute-binding protein family 1.
       0.423
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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