STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49059.1Rieske (2Fe-2S) iron-sulfur domain protein; Converts carnitine to trimethylamine and malic semialdehyde. (374 aa)    
Predicted Functional Partners:
ADO49057.1
Ferredoxin; Converts carnitine to trimethylamine and malic semialdehyde.
 
  
 0.931
ADO49165.1
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: enc:ECL_02779 NADH-dependent HCP oxidoreductase.
  
 0.867
ADO48669.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: enc:ECL_02149 phenylacetate-CoA oxygenase, NAD(P)H oxidoreductase component; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein.
 
  
 0.757
ADO49058.1
KEGG: kva:Kvar_3367 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.735
ADO49060.1
KEGG: kva:Kvar_3365 choline/carnitine/betaine transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.679
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
  
     0.548
ADO50041.1
TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: enc:ECL_00754 2-oxo-hept-3-ene-1,7-dioate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase.
 
   
 0.518
ADO46297.1
PFAM: sulfatase; KEGG: cko:CKO_00025 hypothetical protein.
  
     0.503
ADO47145.1
PFAM: Molybdenum cofactor biosynthesis protein F; KEGG: spe:Spro_0622 MoaF.
  
     0.501
ADO49061.1
TIGRFAM: tartrate dehydrogenase; KEGG: kpe:KPK_3545 tartrate dehydrogenase/decarboxylase; PFAM: isocitrate/isopropylmalate dehydrogenase.
 
     0.476
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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