STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49075.1PFAM: protein of unknown function UPF0005; KEGG: sed:SeD_A1160 hypothetical protein; Belongs to the BI1 family. (219 aa)    
Predicted Functional Partners:
ADO49076.1
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
     
 0.636
htpX
PFAM: peptidase M48 Ste24p; KEGG: esa:ESA_01421 heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.564
ADO49074.1
PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_1483 extracellular solute-binding protein.
       0.508
ADO47673.1
PFAM: Colicin V production protein; KEGG: kva:Kvar_1351 colicin V production protein.
  
    0.481
ADO49800.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: ent:Ent638_0716 periplasmic chaperone; Belongs to the skp family.
  
     0.481
ADO50465.1
KEGG: cko:CKO_00145 putative uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX.
  
     0.458
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.