Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADO49084.1PFAM: protein of unknown function DUF307; KEGG: kpn:KPN_00990 hypothetical protein. (148 aa)    
Predicted Functional Partners:
ADO49085.1
TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical protein; KEGG: enc:ECL_02686 hypothetical protein.
  
  
 0.868
ADO49083.1
PFAM: UvrD/REP helicase; KEGG: kva:Kvar_3394 UvrD/REP helicase.
       0.621
ADO46647.1
TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: enc:ECL_04735 YccS/YhfK family integral membrane protein.
 
  
 0.551
ADO49551.1
PFAM: protein of unknown function DUF107; KEGG: set:SEN0481 hypothetical protein.
   
    0.498
ADO48334.1
PFAM: protein of unknown function DUF440; KEGG: kva:Kvar_1991 protein of unknown function DUF440; Belongs to the UPF0263 family.
  
     0.413
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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