STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49085.1TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical protein; KEGG: enc:ECL_02686 hypothetical protein. (711 aa)    
Predicted Functional Partners:
ADO49084.1
PFAM: protein of unknown function DUF307; KEGG: kpn:KPN_00990 hypothetical protein.
  
  
 0.814
ADO50624.1
PFAM: protein of unknown function DUF1040; KEGG: enc:ECL_05123 hypothetical protein.
  
     0.565
ADO49083.1
PFAM: UvrD/REP helicase; KEGG: kva:Kvar_3394 UvrD/REP helicase.
       0.543
ADO46551.1
Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
  
     0.536
ADO49724.1
KEGG: enc:ECL_01069 fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.510
ADO49163.1
PFAM: protein of unknown function DUF340 membrane; KEGG: ses:SARI_02024 hypothetical protein.
  
     0.506
ADO47487.1
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.499
ADO50510.1
PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein.
  
     0.432
ADO47696.1
PFAM: YfbU family protein; KEGG: kpu:KP1_3931 hypothetical protein; Belongs to the UPF0304 family.
  
     0.404
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.