STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49088.1PFAM: OmpA/MotB domain protein; KEGG: enc:ECL_02689 putative outer membrane lipoprotein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (362 aa)    
Predicted Functional Partners:
ADO49800.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: ent:Ent638_0716 periplasmic chaperone; Belongs to the skp family.
  
 
 0.930
ADO46290.1
KEGG: enc:ECL_00013 putative ATP/GTP-binding protein.
 
 
 0.810
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.809
ADO48044.1
PFAM: porin Gram-negative type; KEGG: enc:ECL_03245 porin family protein; Belongs to the Gram-negative porin family.
  
 0.807
ADO47763.1
PFAM: porin Gram-negative type; KEGG: kpn:KPN_01445 outer membrane pore protein N, non-specific; Belongs to the Gram-negative porin family.
  
 0.798
ADO48688.1
PFAM: porin Gram-negative type; KEGG: kpn:KPN_01445 outer membrane pore protein N, non-specific; Belongs to the Gram-negative porin family.
  
 0.797
ADO46801.1
PFAM: OmpA/MotB domain protein; KEGG: sdy:SDY_0930 outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
0.771
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
 
 0.753
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occupies a key intermediary position in the Tol-Pal system because it communicates directly with both membrane-embedded components, Pal in the outer membrane and TolA in the inner membrane.
  
 
 0.750
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
   
 
 0.747
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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