STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49094.1PFAM: Mammalian cell entry related domain protein; KEGG: ses:SARI_01945 paraquat-inducible protein B. (552 aa)    
Predicted Functional Partners:
ADO49095.1
Integral membrane protein, PqiA family; KEGG: kpu:KP1_1951 paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A.
 
  
 0.964
ADO49093.1
PFAM: protein of unknown function DUF330; KEGG: kpe:KPK_3587 putative lipoprotein.
 
   
 0.957
ADO48215.1
KEGG: ent:Ent638_2403 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A.
 
  
 0.826
rlmL
rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.783
ADO49096.1
KEGG: enc:ECL_02697 putative ABC transporter ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.749
ADO49098.1
PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: sea:SeAg_B1018 MOSC domain protein.
       0.521
rmf
Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
  
    0.487
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.