STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49130.1Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cro:ROD_09691 putative DNA binding protein. (282 aa)    
Predicted Functional Partners:
ADO48855.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cko:CKO_00363 hypothetical protein.
  
     0.773
ADO47453.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spq:SPAB_00354 putative DNA-binding transcriptional regulator.
  
     0.770
ADO48392.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); KEGG: kpu:KP1_3190 putative transcriptional regulator.
  
     0.573
ADO47954.1
KEGG: kpn:KPN_01553 hypothetical protein.
 
  
 0.544
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
 
  
 0.540
ADO49131.1
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: cro:ROD_09681 hypothetical protein.
       0.536
ADO47522.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: enc:ECL_03810 RpiR family transcriptional regulator.
  
   
 0.531
ADO49132.1
KEGG: cro:ROD_09671 hypothetical protein.
       0.504
ADO49133.1
PFAM: Transketolase domain-containing protein; KEGG: cro:ROD_09661 hypothetical protein.
       0.488
ADO49134.1
PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cro:ROD_09651 hypothetical protein.
       0.488
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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