Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49172.1PFAM: Lytic transglycosylase catalytic; KEGG: enc:ECL_02786 hypothetical protein. (148 aa)    
Predicted Functional Partners:
ADO49184.1
KEGG: enc:ECL_02798 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein.
 
  
 0.662
ADO49181.1
KEGG: cko:CKO_02225 hypothetical protein; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
     0.611
ADO49173.1
Glycoside hydrolase family 18; KEGG: cko:CKO_02217 hypothetical protein; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; PKD domain containing protein; Carbohydrate-binding family V/XII; SMART: chitinase II; PKD domain containing protein; Carbohydrate-binding family V/XII.
       0.595
ADO49171.1
Chitinase; PFAM: glycoside hydrolase family 19; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: cko:CKO_02215 hypothetical protein; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein.
 
     0.581
ADO47284.1
Type II secretion system F domain protein; KEGG: cro:ROD_46541 putative type IV pilus biogenesis protein; manually curated; PFAM: Type II secretion system F domain.
 
     0.513
ADO50097.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A3198 fimbrial usher protein.
  
     0.502
ADO49174.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
     0.471
ADO49182.1
KEGG: cko:CKO_02226 hypothetical protein; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
 
     0.461
ADO49183.1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
       0.453
ADO50096.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sew:SeSA_A3199 fimbrial protein.
  
     0.421
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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