Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO49216.1YidE/YbjL duplication; KEGG: cko:CKO_02260 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein. (561 aa)    
Predicted Functional Partners:
ADO49215.1
KEGG: ses:SARI_02059 hypothetical protein.
     
 0.488
ADO46647.1
TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: enc:ECL_04735 YccS/YhfK family integral membrane protein.
  
     0.483
ADO49088.1
PFAM: OmpA/MotB domain protein; KEGG: enc:ECL_02689 putative outer membrane lipoprotein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
    0.473
ADO49789.1
Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator.
  
     0.466
ADO49217.1
PFAM: regulatory protein TetR; KEGG: kpe:KPK_3687 transcriptional regulator, TetR family.
   
  
 0.446
ADO49848.1
PFAM: Uncharacterised conserved protein UCP006287; KEGG: enc:ECL_00919 hypothetical protein; Belongs to the UPF0231 family.
  
     0.432
ADO48334.1
PFAM: protein of unknown function DUF440; KEGG: kva:Kvar_1991 protein of unknown function DUF440; Belongs to the UPF0263 family.
  
     0.425
ADO50654.1
PFAM: Fimbrial protein domain-containing protein; KEGG: stt:t3659 fimbrial subunit protein.
  
     0.408
ADO47943.1
KEGG: kva:Kvar_1612 hypothetical protein.
  
     0.402
ADO47562.1
KEGG: enc:ECL_03770 hypothetical protein.
  
     0.401
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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