STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49244.1PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_02296 hypothetical protein. (433 aa)    
Predicted Functional Partners:
ADO49245.1
KEGG: enc:ECL_02902 glucan 1,3-alpha-glucosidase; PFAM: glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
 
     0.820
ADO50043.1
KEGG: kva:Kvar_4470 4-hydroxyphenylacetate transporter; TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1.
  
     0.586
ADO49342.1
PFAM: Heparinase II/III family protein; KEGG: ypy:YPK_3711 heparinase II/III family protein.
 
    0.563
ADO46879.1
Regulatory protein GntR HTH; KEGG: cko:CKO_04496 DNA-binding transcriptional repressor ExuR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH.
 
   
 0.527
ADO49243.1
KEGG: kpu:KP1_1813 putative periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
 
     0.490
rhaT
L-rhamnose-proton symporter, RhaT family, DMT superfamily; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.
  
    0.470
ADO46749.1
PFAM: protein of unknown function DUF1471; KEGG: ent:Ent638_3673 hypothetical protein.
  
     0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.