Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49247.1PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: kpu:KP1_1808 hypothetical protein. (300 aa)    
Predicted Functional Partners:
ADO48380.1
PFAM: LPP repeat-containing protein; KEGG: kpu:KP1_3230 murein lipoprotein.
  
   
 0.603
ADO49108.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: kva:Kvar_3424 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.598
ADO49246.1
ABC transporter related protein; KEGG: enc:ECL_02903 putative transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.502
ADO48802.1
PFAM: protein of unknown function Spy-related; KEGG: kva:Kvar_3088 protein of unknown function Spy-related protein.
  
    0.448
ADO47428.1
KEGG: kva:Kvar_1155 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase.
  
     0.447
ADO49248.1
KEGG: hypothetical protein.
       0.411
ADO50233.1
PFAM: MscS Mechanosensitive ion channel; KEGG: cko:CKO_03675 hypothetical protein.
 
    0.409
ADO49735.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cko:CKO_02961 hypothetical protein.
 
  
 0.406
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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