STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsFerritin Dps family protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. (167 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.740
ADO49553.1
Copper-translocating P-type ATPase; KEGG: cko:CKO_02665 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
  
  
 0.737
ADO46875.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: enc:ECL_04498 hypothetical protein.
  
    0.716
ADO47718.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: cko:CKO_00524 hypothetical protein.
  
    0.712
ADO48592.1
PFAM: 30S ribosomal subunit S22; KEGG: kva:Kvar_2457 30S ribosomal subunit S22.
   
    0.688
ADO48589.1
TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: sfv:SFV_1739 osmotically inducible protein; PFAM: OsmC family protein.
 
  
 0.672
ADO49427.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.613
ADO49656.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: enc:ECL_01160 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
  
 0.613
ADO49017.1
Flavoprotein WrbA; KEGG: cko:CKO_02047 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase.
  
  
 0.612
ADO50061.1
KEGG: bur:Bcep18194_B2332 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
  
  
 0.545
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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