Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rlmFrRNA (adenine-N(6)-)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA. (308 aa)    
Predicted Functional Partners:
ADO49262.1
PFAM: flavin reductase domain protein FMN-binding; KEGG: kva:Kvar_3545 flavin reductase domain protein FMN-binding protein.
       0.670
ADO46886.1
PFAM: protein of unknown function DUF45; KEGG: enc:ECL_04487 hypothetical protein.
 
     0.628
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
      
 0.550
rlmJ
Protein of unknown function DUF519; Specifically methylates the adenine in position 2030 of 23S rRNA.
      
 0.525
ADO48518.1
PFAM: Protein of unknown function DUF2132; KEGG: eca:ECA2239 hypothetical protein.
 
     0.454
ADO47840.1
PFAM: protein of unknown function DUF1456; KEGG: kva:Kvar_1504 protein of unknown function DUF1456.
  
     0.432
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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