STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49279.1PFAM: ABC-2 type transporter; KEGG: ent:Ent638_1283 ABC-2 type transporter. (368 aa)    
Predicted Functional Partners:
ADO49277.1
KEGG: cko:CKO_02333 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.978
ADO49276.1
PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02940 putative HlyD family secretion protein.
 
  
 0.958
ADO49278.1
PFAM: ABC-2 type transporter; KEGG: set:SEN0762 putative inner membrane protein.
 
 
 
0.907
ADO49275.1
PFAM: Transcriptional regulator TetR; regulatory protein TetR; KEGG: cro:ROD_07961 TetR-family transcriptional regulator.
 
  
 0.847
ADO49023.1
PFAM: secretion protein HlyD family protein; KEGG: cko:CKO_04936 hypothetical protein.
 
  
 0.738
ADO49024.1
KEGG: kva:Kvar_4530 ABC transporter related protein; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase.
 
 
0.631
ADO49025.1
PFAM: ABC-2 type transporter; KEGG: kpu:KP1_0698 antibiotic transport system permease component.
 
  
 
0.564
macB
ABC transporter related protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
   
 0.551
ADO48638.1
KEGG: ent:Ent638_2127 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.509
rhlE
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.
       0.500
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.